Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
EPHA1P21709 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
EPHA1P21709 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.83□□□□□ -0.36
EPHA1P21709 SOCS2P1-201ENST00000417727 557 ntBASIC12.83□□□□□ -0.36
EPHA1P21709 AC136604.1-201ENST00000418535 575 ntBASIC12.83□□□□□ -0.36
EPHA1P21709 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.83□□□□□ -0.36
EPHA1P21709 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.83□□□□□ -0.36
EPHA1P21709 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.83□□□□□ -0.36
EPHA1P21709 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.83□□□□□ -0.36
EPHA1P21709 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.83□□□□□ -0.36
EPHA1P21709 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.83□□□□□ -0.36
EPHA1P21709 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.83□□□□□ -0.36
EPHA1P21709 PTP4A1P2-201ENST00000546033 454 ntBASIC12.83□□□□□ -0.36
EPHA1P21709 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.83□□□□□ -0.36
EPHA1P21709 AL359711.2-201ENST00000563105 872 ntBASIC12.83□□□□□ -0.36
EPHA1P21709 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.83□□□□□ -0.36
EPHA1P21709 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.83□□□□□ -0.36
EPHA1P21709 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.83□□□□□ -0.36
EPHA1P21709 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.83□□□□□ -0.36
EPHA1P21709 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.83□□□□□ -0.36
EPHA1P21709 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.83□□□□□ -0.36
EPHA1P21709 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.83□□□□□ -0.36
EPHA1P21709 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
EPHA1P21709 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
EPHA1P21709 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.83□□□□□ -0.36
EPHA1P21709 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
EPHA1P21709 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.83□□□□□ -0.36
EPHA1P21709 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
EPHA1P21709 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
EPHA1P21709 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EPHA1P21709 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.83□□□□□ -0.36
EPHA1P21709 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.82□□□□□ -0.36
EPHA1P21709 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
EPHA1P21709 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
EPHA1P21709 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.82□□□□□ -0.36
EPHA1P21709 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.82□□□□□ -0.36
EPHA1P21709 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
EPHA1P21709 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
EPHA1P21709 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
EPHA1P21709 AC134915.1-201ENST00000426461 574 ntBASIC12.82□□□□□ -0.36
EPHA1P21709 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.82□□□□□ -0.36
EPHA1P21709 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.82□□□□□ -0.36
EPHA1P21709 AL355864.2-201ENST00000447420 863 ntBASIC12.82□□□□□ -0.36
EPHA1P21709 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.82□□□□□ -0.36
EPHA1P21709 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.82□□□□□ -0.36
EPHA1P21709 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.82□□□□□ -0.36
EPHA1P21709 ENPP7P5-201ENST00000541031 1031 ntBASIC12.82□□□□□ -0.36
EPHA1P21709 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 BRI3BPP1-201ENST00000594224 787 ntBASIC12.82□□□□□ -0.36
EPHA1P21709 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.82□□□□□ -0.36
EPHA1P21709 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 CFTRP2-201ENST00000634304 199 ntBASIC12.82□□□□□ -0.36
EPHA1P21709 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 INTS4P2-202ENST00000614726 2019 ntBASIC12.82□□□□□ -0.36
EPHA1P21709 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
EPHA1P21709 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
EPHA1P21709 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
EPHA1P21709 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.82□□□□□ -0.36
EPHA1P21709 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.82□□□□□ -0.36
EPHA1P21709 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.82□□□□□ -0.36
EPHA1P21709 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms