Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.08□□□□□ -0.15
CCNA2P20248 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCNA2P20248 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.08□□□□□ -0.15
CCNA2P20248 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CCNA2P20248 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCNA2P20248 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCNA2P20248 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.08□□□□□ -0.16
CCNA2P20248 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCNA2P20248 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCNA2P20248 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 AC023090.2-201ENST00000625182 2110 ntBASIC14.08□□□□□ -0.16
CCNA2P20248 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.08□□□□□ -0.16
CCNA2P20248 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.08□□□□□ -0.16
CCNA2P20248 AL731571.1-201ENST00000617058 5428 ntBASIC14.08□□□□□ -0.16
CCNA2P20248 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.08□□□□□ -0.16
CCNA2P20248 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.08□□□□□ -0.16
CCNA2P20248 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCNA2P20248 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
CCNA2P20248 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.08□□□□□ -0.16
CCNA2P20248 AL158212.4-201ENST00000624062 1286 ntBASIC14.08□□□□□ -0.16
CCNA2P20248 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CCNA2P20248 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.08□□□□□ -0.16
CCNA2P20248 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CCNA2P20248 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CCNA2P20248 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNA2P20248 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCNA2P20248 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.07□□□□□ -0.16
CCNA2P20248 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
CCNA2P20248 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCNA2P20248 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CCNA2P20248 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCNA2P20248 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 CLK3P2-201ENST00000427566 1453 ntBASIC14.07□□□□□ -0.16
CCNA2P20248 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.07□□□□□ -0.16
CCNA2P20248 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.07□□□□□ -0.16
CCNA2P20248 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.07□□□□□ -0.16
CCNA2P20248 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.07□□□□□ -0.16
CCNA2P20248 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCNA2P20248 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
CCNA2P20248 RPL5P21-201ENST00000404620 815 ntBASIC14.07□□□□□ -0.16
CCNA2P20248 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.07□□□□□ -0.16
CCNA2P20248 AC023310.3-201ENST00000557027 670 ntBASIC14.07□□□□□ -0.16
CCNA2P20248 AC100756.1-201ENST00000562736 682 ntBASIC14.07□□□□□ -0.16
CCNA2P20248 AC138749.3-201ENST00000567691 622 ntBASIC14.07□□□□□ -0.16
CCNA2P20248 AC092337.1-201ENST00000568699 1129 ntBASIC14.07□□□□□ -0.16
CCNA2P20248 AC116165.1-201ENST00000611806 668 ntBASIC14.07□□□□□ -0.16
CCNA2P20248 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.07□□□□□ -0.16
CCNA2P20248 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.07□□□□□ -0.16
CCNA2P20248 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.07□□□□□ -0.16
CCNA2P20248 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNA2P20248 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.07□□□□□ -0.16
CCNA2P20248 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms