Protein–RNA interactions for Protein: P17538

CTRB1, Chymotrypsinogen B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTRB1P17538 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CTRB1P17538 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CTRB1P17538 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 AC211486.1-202ENST00000416371 468 ntBASIC12.54□□□□□ -0.4
CTRB1P17538 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.54□□□□□ -0.4
CTRB1P17538 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.54□□□□□ -0.4
CTRB1P17538 AC211476.1-201ENST00000503899 468 ntBASIC12.54□□□□□ -0.4
CTRB1P17538 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.54□□□□□ -0.4
CTRB1P17538 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.54□□□□□ -0.4
CTRB1P17538 AC105021.1-202ENST00000570572 669 ntBASIC12.54□□□□□ -0.4
CTRB1P17538 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 AC006538.3-201ENST00000612495 578 ntBASIC12.54□□□□□ -0.4
CTRB1P17538 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.54□□□□□ -0.4
CTRB1P17538 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.54□□□□□ -0.4
CTRB1P17538 AC009093.7-201ENST00000623853 1223 ntBASIC12.54□□□□□ -0.4
CTRB1P17538 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.54□□□□□ -0.4
CTRB1P17538 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.54□□□□□ -0.4
CTRB1P17538 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CTRB1P17538 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.54□□□□□ -0.4
CTRB1P17538 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.54□□□□□ -0.4
CTRB1P17538 MIR193BHG-211ENST00000641433 5365 ntBASIC12.54□□□□□ -0.4
CTRB1P17538 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTRB1P17538 MTHFR-210ENST00000641407 2387 ntBASIC12.54□□□□□ -0.4
CTRB1P17538 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CTRB1P17538 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.53□□□□□ -0.4
CTRB1P17538 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 AC090616.6-203ENST00000579186 1945 ntBASIC12.53□□□□□ -0.4
CTRB1P17538 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 SPDYE14P-201ENST00000442619 822 ntBASIC12.53□□□□□ -0.4
CTRB1P17538 AC023141.5-201ENST00000458585 616 ntBASIC12.53□□□□□ -0.4
CTRB1P17538 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.53□□□□□ -0.4
CTRB1P17538 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 BANF1P1-201ENST00000553684 263 ntBASIC12.53□□□□□ -0.4
CTRB1P17538 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.53□□□□□ -0.4
CTRB1P17538 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CTRB1P17538 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.53□□□□□ -0.4
CTRB1P17538 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.53□□□□□ -0.4
CTRB1P17538 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTRB1P17538 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms