Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 C8orf49-201ENST00000525043 1968 ntBASIC12.6□□□□□ -0.39
HIST1H1DP16402 DMBT1P1-203ENST00000636837 4628 ntBASIC12.6□□□□□ -0.39
HIST1H1DP16402 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 CICP8-201ENST00000455800 2813 ntBASIC12.6□□□□□ -0.39
HIST1H1DP16402 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 RPL13AP25-201ENST00000484130 612 ntBASIC12.6□□□□□ -0.39
HIST1H1DP16402 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 AL158211.3-201ENST00000607385 239 ntBASIC12.6□□□□□ -0.39
HIST1H1DP16402 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 AL603764.1-201ENST00000636452 321 ntBASIC12.6□□□□□ -0.39
HIST1H1DP16402 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 AC011498.7-201ENST00000624986 2027 ntBASIC12.6□□□□□ -0.39
HIST1H1DP16402 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
HIST1H1DP16402 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 KRT8P35-201ENST00000483942 1338 ntBASIC12.6□□□□□ -0.39
HIST1H1DP16402 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1DP16402 AC003102.2-201ENST00000589195 1469 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 AC090643.2-201ENST00000623442 2029 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 HSPA8P5-201ENST00000456928 2069 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 AC092580.3-201ENST00000430932 139 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 AL589987.1-201ENST00000453380 819 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 RARRES2P5-201ENST00000564013 466 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 SNHG9-202ENST00000564014 471 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 SRD5A3P1-201ENST00000603021 949 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 AL662799.1-202ENST00000614205 422 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms