Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 SALL4P5-201ENST00000419001 1760 ntBASIC13.48□□□□□ -0.25
HMGN1P05114 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 KRT8P35-201ENST00000483942 1338 ntBASIC13.48□□□□□ -0.25
HMGN1P05114 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.48□□□□□ -0.25
HMGN1P05114 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.48□□□□□ -0.25
HMGN1P05114 AC007969.1-201ENST00000433675 447 ntBASIC13.48□□□□□ -0.25
HMGN1P05114 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 AC097493.3-201ENST00000509725 367 ntBASIC13.48□□□□□ -0.25
HMGN1P05114 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.48□□□□□ -0.25
HMGN1P05114 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.48□□□□□ -0.25
HMGN1P05114 SRD5A3P1-201ENST00000603021 949 ntBASIC13.48□□□□□ -0.25
HMGN1P05114 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMGN1P05114 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HMGN1P05114 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGN1P05114 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HMGN1P05114 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGN1P05114 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGN1P05114 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
HMGN1P05114 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGN1P05114 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.47□□□□□ -0.25
HMGN1P05114 AC092580.3-201ENST00000430932 139 ntBASIC13.47□□□□□ -0.25
HMGN1P05114 AC241585.1-201ENST00000433527 519 ntBASIC13.47□□□□□ -0.25
HMGN1P05114 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.47□□□□□ -0.25
HMGN1P05114 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 VDAC1P7-201ENST00000462417 847 ntBASIC13.47□□□□□ -0.25
HMGN1P05114 RN7SL399P-201ENST00000471648 279 ntBASIC13.47□□□□□ -0.25
HMGN1P05114 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.47□□□□□ -0.25
HMGN1P05114 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGN1P05114 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.47□□□□□ -0.25
HMGN1P05114 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.47□□□□□ -0.25
HMGN1P05114 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms