Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.07■□□□□ 0
RIPK2O43353 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.06■□□□□ 0
RIPK2O43353 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RIPK2O43353 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RIPK2O43353 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.06■□□□□ 0
RIPK2O43353 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.06■□□□□ 0
RIPK2O43353 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.06■□□□□ 0
RIPK2O43353 AL589987.1-201ENST00000453380 819 ntBASIC15.06■□□□□ 0
RIPK2O43353 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.06■□□□□ 0
RIPK2O43353 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 FAM86LP-201ENST00000478302 853 ntBASIC15.06■□□□□ 0
RIPK2O43353 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.06■□□□□ 0
RIPK2O43353 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 AC022616.1-201ENST00000518688 554 ntBASIC15.06■□□□□ 0
RIPK2O43353 AC027369.6-201ENST00000525520 931 ntBASIC15.06■□□□□ 0
RIPK2O43353 AC131206.1-201ENST00000538078 1211 ntBASIC15.06■□□□□ 0
RIPK2O43353 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.06■□□□□ 0
RIPK2O43353 AC138761.1-201ENST00000584393 385 ntBASIC15.06■□□□□ 0
RIPK2O43353 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.06■□□□□ 0
RIPK2O43353 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.06■□□□□ 0
RIPK2O43353 AL121894.2-201ENST00000602977 491 ntBASIC15.06■□□□□ 0
RIPK2O43353 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.06■□□□□ 0
RIPK2O43353 AL662799.1-202ENST00000614205 422 ntBASIC15.06■□□□□ 0
RIPK2O43353 BX539320.1-201ENST00000623759 877 ntBASIC15.06■□□□□ 0
RIPK2O43353 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.06■□□□□ 0
RIPK2O43353 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.06■□□□□ 0
RIPK2O43353 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RIPK2O43353 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.06■□□□□ 0
RIPK2O43353 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
RIPK2O43353 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.06■□□□□ 0
RIPK2O43353 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.06■□□□□ 0
RIPK2O43353 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RIPK2O43353 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RIPK2O43353 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RIPK2O43353 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.05■□□□□ 0
RIPK2O43353 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.05■□□□□ 0
RIPK2O43353 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.05■□□□□ 0
RIPK2O43353 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RIPK2O43353 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
RIPK2O43353 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RIPK2O43353 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RIPK2O43353 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.05■□□□□ 0
RIPK2O43353 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
RIPK2O43353 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.05■□□□□ 0
RIPK2O43353 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RIPK2O43353 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.05■□□□□ -0
RIPK2O43353 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.05■□□□□ -0
RIPK2O43353 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.05■□□□□ -0
RIPK2O43353 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.05■□□□□ -0
RIPK2O43353 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.05■□□□□ -0
RIPK2O43353 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.05■□□□□ -0
RIPK2O43353 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.05■□□□□ -0
RIPK2O43353 AC093813.1-201ENST00000605066 256 ntBASIC15.05■□□□□ -0
RIPK2O43353 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RIPK2O43353 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.05■□□□□ -0
RIPK2O43353 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RIPK2O43353 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.05■□□□□ -0
RIPK2O43353 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
RIPK2O43353 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 AC019294.4-201ENST00000561777 2905 ntBASIC15.05■□□□□ -0
RIPK2O43353 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.05■□□□□ -0
RIPK2O43353 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms