Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 ZBED1P1-201ENST00000502364 1930 ntBASIC13.9□□□□□ -0.18
ARHGEF9O43307 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.9□□□□□ -0.19
ARHGEF9O43307 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
ARHGEF9O43307 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ARHGEF9O43307 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
ARHGEF9O43307 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.9□□□□□ -0.19
ARHGEF9O43307 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
ARHGEF9O43307 COL6A4P2-202ENST00000504443 2753 ntBASIC13.89□□□□□ -0.19
ARHGEF9O43307 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 WASH3P-207ENST00000560956 1394 ntBASIC13.89□□□□□ -0.19
ARHGEF9O43307 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 MIR1909-201ENST00000411312 80 ntBASIC13.89□□□□□ -0.19
ARHGEF9O43307 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 DOC2GP-202ENST00000514950 1163 ntBASIC13.89□□□□□ -0.19
ARHGEF9O43307 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 LINC01115-203ENST00000606068 577 ntBASIC13.89□□□□□ -0.19
ARHGEF9O43307 IGHV3-72-202ENST00000621503 303 ntBASIC13.89□□□□□ -0.19
ARHGEF9O43307 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 AL109936.8-201ENST00000641772 604 ntBASIC13.89□□□□□ -0.19
ARHGEF9O43307 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 LINC01230-201ENST00000625222 3017 ntBASIC13.89□□□□□ -0.19
ARHGEF9O43307 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF9O43307 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ARHGEF9O43307 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 MBLAC2-202ENST00000514906 1936 ntBASIC13.88□□□□□ -0.19
ARHGEF9O43307 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 SPDYE19P-201ENST00000338590 713 ntBASIC13.88□□□□□ -0.19
ARHGEF9O43307 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 AL133267.1-201ENST00000398220 340 ntBASIC13.88□□□□□ -0.19
ARHGEF9O43307 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.88□□□□□ -0.19
ARHGEF9O43307 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF9O43307 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms