Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.21□□□□□ -0.13
PDLIM1O00151 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM1O00151 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM1O00151 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDLIM1O00151 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDLIM1O00151 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDLIM1O00151 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.21□□□□□ -0.14
PDLIM1O00151 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.21□□□□□ -0.14
PDLIM1O00151 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDLIM1O00151 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDLIM1O00151 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM1O00151 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDLIM1O00151 AC012617.1-204ENST00000586340 2305 ntBASIC14.2□□□□□ -0.14
PDLIM1O00151 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PDLIM1O00151 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.2□□□□□ -0.14
PDLIM1O00151 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.2□□□□□ -0.14
PDLIM1O00151 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.2□□□□□ -0.14
PDLIM1O00151 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 TREML5P-201ENST00000421694 576 ntBASIC14.2□□□□□ -0.14
PDLIM1O00151 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM1O00151 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM1O00151 AC022447.6-201ENST00000515522 438 ntBASIC14.2□□□□□ -0.14
PDLIM1O00151 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDLIM1O00151 AL138828.2-201ENST00000615812 383 ntBASIC14.2□□□□□ -0.14
PDLIM1O00151 AC073592.8-201ENST00000624126 511 ntBASIC14.2□□□□□ -0.14
PDLIM1O00151 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.2□□□□□ -0.14
PDLIM1O00151 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 LPO-204ENST00000543544 2350 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM1O00151 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.2□□□□□ -0.14
PDLIM1O00151 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.2□□□□□ -0.14
PDLIM1O00151 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM1O00151 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
PDLIM1O00151 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDLIM1O00151 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 LILRP1-201ENST00000444199 1370 ntBASIC14.2□□□□□ -0.14
PDLIM1O00151 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
PDLIM1O00151 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM1O00151 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDLIM1O00151 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM1O00151 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
PDLIM1O00151 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.19□□□□□ -0.14
PDLIM1O00151 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM1O00151 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM1O00151 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDLIM1O00151 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM1O00151 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.19□□□□□ -0.14
PDLIM1O00151 MIR770-201ENST00000390219 98 ntBASIC14.19□□□□□ -0.14
PDLIM1O00151 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PDLIM1O00151 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.19□□□□□ -0.14
PDLIM1O00151 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.19□□□□□ -0.14
PDLIM1O00151 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.19□□□□□ -0.14
PDLIM1O00151 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDLIM1O00151 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.19□□□□□ -0.14
PDLIM1O00151 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.19□□□□□ -0.14
PDLIM1O00151 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM1O00151 AL079307.3-201ENST00000556114 283 ntBASIC14.19□□□□□ -0.14
PDLIM1O00151 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDLIM1O00151 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.19□□□□□ -0.14
PDLIM1O00151 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM1O00151 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.19□□□□□ -0.14
PDLIM1O00151 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM1O00151 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM1O00151 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM1O00151 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms