Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 AC134698.3-201ENST00000523880 214 ntBASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 RN7SL574P-201ENST00000581512 297 ntBASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 CICP23-201ENST00000605013 2741 ntBASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.72□□□□□ -0.05
TBC1D3FA6NER0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 AL157407.1-201ENST00000435784 904 ntBASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.71□□□□□ -0.05
TBC1D3FA6NER0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
TBC1D3FA6NER0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TBC1D3FA6NER0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TBC1D3FA6NER0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TBC1D3FA6NER0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TBC1D3FA6NER0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.71□□□□□ -0.06
TBC1D3FA6NER0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
TBC1D3FA6NER0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 MRPL37P1-201ENST00000592451 1337 ntBASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 ELK2AP-201ENST00000392510 1007 ntBASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms