Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 SLC25A15P3-201ENST00000505530 290 ntBASIC18.15■□□□□ 0.5
LAMB4A4D0S4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LAMB4A4D0S4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 AC068867.1-201ENST00000559855 150 ntBASIC18.14■□□□□ 0.5
LAMB4A4D0S4 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 HPX-213ENST00000615166 826 ntTSL 5 BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 AL132780.4-201ENST00000624870 1135 ntBASIC18.14■□□□□ 0.5
LAMB4A4D0S4 SHMT1P1-201ENST00000419974 1312 ntBASIC18.14■□□□□ 0.5
LAMB4A4D0S4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.14■□□□□ 0.5
LAMB4A4D0S4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.14■□□□□ 0.49
LAMB4A4D0S4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 LINC00634-202ENST00000505157 222 ntBASIC18.14■□□□□ 0.49
LAMB4A4D0S4 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 HERC2P11-201ENST00000562845 725 ntBASIC18.14■□□□□ 0.49
LAMB4A4D0S4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 AC100756.2-201ENST00000569537 736 ntBASIC18.14■□□□□ 0.49
LAMB4A4D0S4 RN7SL470P-201ENST00000583069 259 ntBASIC18.14■□□□□ 0.49
LAMB4A4D0S4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LAMB4A4D0S4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.13■□□□□ 0.49
LAMB4A4D0S4 AL139158.3-201ENST00000641212 1562 ntBASIC18.13■□□□□ 0.49
LAMB4A4D0S4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LAMB4A4D0S4 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms