Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC117489.1-201ENST00000625169 3217 ntBASIC11.98□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FAM86MP-201ENST00000340703 885 ntBASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL355994.2-201ENST00000447882 704 ntBASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GAPDHP40-201ENST00000505218 1006 ntBASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 KRT90P-201ENST00000549264 1064 ntBASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL583810.1-201ENST00000553344 1045 ntBASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC145423.3-201ENST00000615987 467 ntBASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LRRC59-203ENST00000576448 1531 ntBASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms