Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 BX640514.1-201ENST00000583223 1918 ntBASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 AL355994.2-201ENST00000447882 704 ntBASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 AC063926.3-201ENST00000624734 5658 ntBASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 PCDHA3-202ENST00000532566 4594 ntBASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AL590440.2-201ENST00000641973 1595 ntBASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 FAM21FP-201ENST00000426241 1131 ntBASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AC100850.1-201ENST00000506768 649 ntBASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AC010328.2-201ENST00000597698 1111 ntBASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AL136301.1-201ENST00000615830 422 ntBASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AC139712.1-201ENST00000378256 1875 ntBASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DTX4Q9Y2E6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DTX4Q9Y2E6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DTX4Q9Y2E6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DTX4Q9Y2E6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
DTX4Q9Y2E6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.71□□□□□ -0.21
DTX4Q9Y2E6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.71□□□□□ -0.21
DTX4Q9Y2E6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms