Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 FAM58BP-201ENST00000439056 645 ntBASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 RN7SL769P-201ENST00000469386 295 ntBASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 AC006122.1-201ENST00000493323 440 ntBASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 SCARNA21-201ENST00000517026 139 ntBASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 AC024681.1-201ENST00000521917 487 ntBASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 AC244452.3-201ENST00000636814 210 ntBASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 AC015909.3-201ENST00000572855 1794 ntBASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 AC064801.2-201ENST00000625052 1303 ntBASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 MYADML-201ENST00000474610 2147 ntBASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KIAA1549Q9HCM3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 CEP164P1-201ENST00000455142 418 ntBASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 MIR6720-201ENST00000611664 98 ntBASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 AP000346.4-201ENST00000614827 381 ntBASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 AC144522.1-201ENST00000625111 1658 ntBASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 LINC01165-201ENST00000445190 1623 ntBASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 TUBB8P8-201ENST00000458717 1058 ntBASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.05□□□□□ -0.32
KIAA1549Q9HCM3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms