Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
COL25A1Q9BXS0 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.52□□□□□ -0.09
COL25A1Q9BXS0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL25A1Q9BXS0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL25A1Q9BXS0 NFIC-211ENST00000641145 8399 ntBASIC14.52□□□□□ -0.09
COL25A1Q9BXS0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL25A1Q9BXS0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.52□□□□□ -0.09
COL25A1Q9BXS0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 FKBP4P7-201ENST00000433874 1363 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 SSR4P1-201ENST00000415143 412 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 ATP5G1P7-201ENST00000444398 400 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC233724.9-201ENST00000511694 407 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AP001979.1-201ENST00000529222 751 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC010202.1-201ENST00000551181 405 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC017100.1-201ENST00000565978 1169 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 KF455155.1-201ENST00000604493 303 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AC068134.4-201ENST00000613365 122 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 AL158032.2-201ENST00000616818 195 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 PIGA-209ENST00000634582 965 ntTSL 2 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.51□□□□□ -0.09
COL25A1Q9BXS0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 MGST3-204ENST00000367888 778 ntTSL 3 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 ACTG1P23-201ENST00000437653 1074 ntBASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 PLAC9P1-203ENST00000440031 223 ntBASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 AL137077.1-201ENST00000442115 528 ntBASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 CDIPT-AS1-203ENST00000638164 713 ntBASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 SLC29A3-201ENST00000373189 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL25A1Q9BXS0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms