Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 FUCA1P1-201ENST00000374476 1351 ntBASIC16.63■□□□□ 0.25
PTPN18Q99952 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PTPN18Q99952 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PTPN18Q99952 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN18Q99952 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN18Q99952 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PTPN18Q99952 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN18Q99952 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN18Q99952 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN18Q99952 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTPN18Q99952 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PTPN18Q99952 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.62■□□□□ 0.25
PTPN18Q99952 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN18Q99952 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN18Q99952 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN18Q99952 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN18Q99952 NDUFB10P1-201ENST00000567319 521 ntBASIC16.62■□□□□ 0.25
PTPN18Q99952 TRMT112P3-201ENST00000580149 358 ntBASIC16.62■□□□□ 0.25
PTPN18Q99952 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN18Q99952 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PTPN18Q99952 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN18Q99952 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PTPN18Q99952 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN18Q99952 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.62■□□□□ 0.25
PTPN18Q99952 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN18Q99952 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
PTPN18Q99952 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
PTPN18Q99952 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN18Q99952 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 MIR1301-201ENST00000408518 82 ntBASIC16.61■□□□□ 0.25
PTPN18Q99952 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN18Q99952 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.61■□□□□ 0.25
PTPN18Q99952 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN18Q99952 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.61■□□□□ 0.25
PTPN18Q99952 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN18Q99952 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN18Q99952 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN18Q99952 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.61■□□□□ 0.25
PTPN18Q99952 AC013553.1-201ENST00000560906 267 ntBASIC16.61■□□□□ 0.25
PTPN18Q99952 CROCCP1-201ENST00000426910 5675 ntBASIC16.61■□□□□ 0.25
PTPN18Q99952 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN18Q99952 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN18Q99952 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PTPN18Q99952 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms