Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RAB40CQ96S21 MYADML-201ENST00000474610 2147 ntBASIC12.08□□□□□ -0.47
RAB40CQ96S21 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.08□□□□□ -0.47
RAB40CQ96S21 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 LINC01115-203ENST00000606068 577 ntBASIC12.08□□□□□ -0.48
RAB40CQ96S21 AL589739.1-201ENST00000607720 493 ntBASIC12.08□□□□□ -0.48
RAB40CQ96S21 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 AL513210.1-201ENST00000629608 234 ntBASIC12.08□□□□□ -0.48
RAB40CQ96S21 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 AC215219.1-201ENST00000400706 1817 ntBASIC12.08□□□□□ -0.48
RAB40CQ96S21 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 CETN4P-206ENST00000642099 2168 ntBASIC12.08□□□□□ -0.48
RAB40CQ96S21 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB40CQ96S21 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB40CQ96S21 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 AC004461.1-201ENST00000412461 403 ntBASIC12.07□□□□□ -0.48
RAB40CQ96S21 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB40CQ96S21 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 AP000344.2-201ENST00000512987 629 ntBASIC12.07□□□□□ -0.48
RAB40CQ96S21 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB40CQ96S21 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 941.5 ms