Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 PUDPP3-201ENST00000445368 636 ntBASIC17.34■□□□□ 0.37
TRIM47Q96LD4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 AL160314.3-201ENST00000556041 767 ntBASIC17.34■□□□□ 0.37
TRIM47Q96LD4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRIM47Q96LD4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 AGAP7P-201ENST00000582299 2062 ntBASIC17.33■□□□□ 0.37
TRIM47Q96LD4 AGAP14-201ENST00000624701 2060 ntBASIC17.33■□□□□ 0.37
TRIM47Q96LD4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRIM47Q96LD4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 RPSAP31-201ENST00000416648 895 ntBASIC17.33■□□□□ 0.36
TRIM47Q96LD4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 AL805961.1-201ENST00000642026 753 ntBASIC17.33■□□□□ 0.36
TRIM47Q96LD4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM47Q96LD4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 MESTP3-201ENST00000503460 968 ntBASIC17.32■□□□□ 0.36
TRIM47Q96LD4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms