Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC11.11□□□□□ -0.63
RNF183Q96D59 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.11□□□□□ -0.63
RNF183Q96D59 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.11□□□□□ -0.63
RNF183Q96D59 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 RNA5SP486-201ENST00000515961 83 ntBASIC11.11□□□□□ -0.63
RNF183Q96D59 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.11□□□□□ -0.63
RNF183Q96D59 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.11□□□□□ -0.63
RNF183Q96D59 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.11□□□□□ -0.63
RNF183Q96D59 RN7SL48P-201ENST00000579283 293 ntBASIC11.11□□□□□ -0.63
RNF183Q96D59 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.11□□□□□ -0.63
RNF183Q96D59 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.11□□□□□ -0.63
RNF183Q96D59 AC138951.2-201ENST00000623455 1161 ntBASIC11.11□□□□□ -0.63
RNF183Q96D59 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.11□□□□□ -0.63
RNF183Q96D59 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
RNF183Q96D59 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RNF183Q96D59 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
RNF183Q96D59 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RNF183Q96D59 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
RNF183Q96D59 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
RNF183Q96D59 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RNF183Q96D59 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
RNF183Q96D59 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.1□□□□□ -0.63
RNF183Q96D59 KRT8P14-201ENST00000414254 1442 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
RNF183Q96D59 AC105250.1-201ENST00000509378 2057 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RNF183Q96D59 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
RNF183Q96D59 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 TPM3P8-201ENST00000330554 643 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 CD8B2-202ENST00000417670 633 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 AC026954.1-201ENST00000429771 1293 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 FAM197Y7-201ENST00000432892 766 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.1□□□□□ -0.63
RNF183Q96D59 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC11.1□□□□□ -0.63
RNF183Q96D59 AL355994.2-201ENST00000447882 704 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 AC092658.1-201ENST00000505836 891 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.1□□□□□ -0.63
RNF183Q96D59 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.1□□□□□ -0.63
RNF183Q96D59 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC11.1□□□□□ -0.63
RNF183Q96D59 AC010328.2-201ENST00000597698 1111 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 AL603764.1-201ENST00000636452 321 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.1□□□□□ -0.63
RNF183Q96D59 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RNF183Q96D59 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RNF183Q96D59 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF183Q96D59 AC148477.4-201ENST00000613430 1793 ntBASIC11.1□□□□□ -0.63
RNF183Q96D59 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF183Q96D59 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms