Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 TMBIM7P-202ENST00000641474 1516 ntBASIC17.37■□□□□ 0.37
STAG1Q8WVM7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 AC012441.2-201ENST00000444843 739 ntBASIC17.37■□□□□ 0.37
STAG1Q8WVM7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 BNIP3P13-201ENST00000599968 566 ntBASIC17.37■□□□□ 0.37
STAG1Q8WVM7 AL023803.2-201ENST00000620080 638 ntBASIC17.37■□□□□ 0.37
STAG1Q8WVM7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 AL139099.5-201ENST00000635274 300 ntBASIC17.37■□□□□ 0.37
STAG1Q8WVM7 AC244452.3-201ENST00000636814 210 ntBASIC17.37■□□□□ 0.37
STAG1Q8WVM7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 AL008718.2-201ENST00000609206 1313 ntBASIC17.37■□□□□ 0.37
STAG1Q8WVM7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 AC091804.1-201ENST00000486888 567 ntBASIC17.36■□□□□ 0.37
STAG1Q8WVM7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 AC015802.1-201ENST00000588104 1449 ntBASIC17.36■□□□□ 0.37
STAG1Q8WVM7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
STAG1Q8WVM7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 AC215219.1-201ENST00000400706 1817 ntBASIC17.35■□□□□ 0.37
STAG1Q8WVM7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms