Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 AC104073.2-201ENST00000453737 312 ntBASIC20.6■□□□□ 0.89
TMC1Q8TDI8 AC005740.2-201ENST00000511085 419 ntBASIC20.6■□□□□ 0.89
TMC1Q8TDI8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 AC138649.2-201ENST00000615886 705 ntBASIC20.6■□□□□ 0.89
TMC1Q8TDI8 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMC1Q8TDI8 AL390755.1-201ENST00000623716 2027 ntBASIC20.6■□□□□ 0.89
TMC1Q8TDI8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 AL513477.1-201ENST00000602865 2407 ntBASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 DUX4L46-201ENST00000566845 751 ntBASIC20.59■□□□□ 0.89
TMC1Q8TDI8 NDUFV2P1-201ENST00000596415 907 ntBASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.59■□□□□ 0.89
TMC1Q8TDI8 AL023803.2-201ENST00000620080 638 ntBASIC20.59■□□□□ 0.89
TMC1Q8TDI8 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 AC018529.2-202ENST00000611482 3087 ntBASIC20.59■□□□□ 0.89
TMC1Q8TDI8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC20.59■□□□□ 0.89
TMC1Q8TDI8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 LINC00552-201ENST00000625151 2579 ntBASIC20.58■□□□□ 0.89
TMC1Q8TDI8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 DPM3-202ENST00000368399 517 ntBASIC20.58■□□□□ 0.89
TMC1Q8TDI8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMC1Q8TDI8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms