Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 CICP17-201ENST00000418553 2377 ntBASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 GPS2P2-201ENST00000430745 888 ntBASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3IL1Q8TBN0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 AL645937.2-201ENST00000396808 931 ntBASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 AL627223.1-201ENST00000416693 442 ntBASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 HTR5BP-201ENST00000430851 1154 ntBASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 RBPMS2P1-201ENST00000437762 623 ntBASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB3IL1Q8TBN0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms