Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 AL691403.2-201ENST00000618460 490 ntBASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 AC241585.1-201ENST00000433527 519 ntBASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DNAAF1Q8NEP3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AL137783.1-201ENST00000623494 1896 ntBASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms