Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 RN7SKP230-201ENST00000365642 335 ntBASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 AC027612.2-202ENST00000445955 1199 ntBASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 RN7SL173P-201ENST00000461853 292 ntBASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 IGHV1-12-201ENST00000518307 205 ntBASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 AC003686.1-201ENST00000550956 1034 ntBASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 AC006116.2-201ENST00000589958 988 ntBASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 PYY2-201ENST00000315776 282 ntBASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 AC018638.5-201ENST00000450885 754 ntBASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 GNG10P1-201ENST00000452289 199 ntBASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 MIR6125-201ENST00000618986 96 ntBASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 AC110057.1-201ENST00000636031 898 ntBASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 RN7SL602P-201ENST00000578326 324 ntBASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 RN7SL718P-201ENST00000581254 303 ntBASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms