Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 AC144522.1-201ENST00000625111 1658 ntBASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 HINT2P1-201ENST00000419438 481 ntBASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 NAP1L6-202ENST00000641404 1222 ntBASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 CYP4F23P-201ENST00000593402 1579 ntBASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CCDC62Q6P9F0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 LINC01101-201ENST00000622953 1884 ntBASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 ACE3P-201ENST00000423435 1973 ntBASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 MAGEA5-201ENST00000446757 942 ntBASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 MIR4706-201ENST00000582134 82 ntBASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 PPT1-215ENST00000641471 2368 ntBASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms