Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 POM121L8P-201ENST00000417732 1281 ntBASIC15.61■□□□□ 0.09
RNF43Q68DV7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 POM121L9P-203ENST00000441984 1285 ntBASIC15.61■□□□□ 0.09
RNF43Q68DV7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 ENPP7P14-201ENST00000621765 1040 ntBASIC15.61■□□□□ 0.09
RNF43Q68DV7 AC138951.2-201ENST00000623455 1161 ntBASIC15.61■□□□□ 0.09
RNF43Q68DV7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 MBLAC2-202ENST00000514906 1936 ntBASIC15.6■□□□□ 0.09
RNF43Q68DV7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 AC104306.2-201ENST00000451877 341 ntBASIC15.6■□□□□ 0.09
RNF43Q68DV7 AL590640.2-201ENST00000457038 527 ntBASIC15.6■□□□□ 0.09
RNF43Q68DV7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 FAM86HP-204ENST00000513466 959 ntBASIC15.6■□□□□ 0.09
RNF43Q68DV7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.6■□□□□ 0.09
RNF43Q68DV7 AC244452.3-201ENST00000636814 210 ntBASIC15.6■□□□□ 0.09
RNF43Q68DV7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 CICP11-201ENST00000434745 2827 ntBASIC15.6■□□□□ 0.09
RNF43Q68DV7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RNF43Q68DV7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF43Q68DV7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 AL359183.1-201ENST00000623796 2132 ntBASIC15.59■□□□□ 0.09
RNF43Q68DV7 AC012508.2-201ENST00000567613 1472 ntBASIC15.59■□□□□ 0.09
RNF43Q68DV7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms