Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 AL049840.3-201ENST00000602669 611 ntBASIC14.01□□□□□ -0.17
LPCAT4Q643R3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LPCAT4Q643R3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 KRT8P14-201ENST00000414254 1442 ntBASIC14□□□□□ -0.17
LPCAT4Q643R3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14□□□□□ -0.17
LPCAT4Q643R3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LPCAT4Q643R3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
LPCAT4Q643R3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14□□□□□ -0.17
LPCAT4Q643R3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14□□□□□ -0.17
LPCAT4Q643R3 AC098831.1-202ENST00000438821 336 ntBASIC14□□□□□ -0.17
LPCAT4Q643R3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 AC079781.3-201ENST00000449110 356 ntBASIC14□□□□□ -0.17
LPCAT4Q643R3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 AC018845.2-201ENST00000568326 409 ntBASIC14□□□□□ -0.17
LPCAT4Q643R3 MIR7706-201ENST00000613747 67 ntBASIC14□□□□□ -0.17
LPCAT4Q643R3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14□□□□□ -0.17
LPCAT4Q643R3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14□□□□□ -0.17
LPCAT4Q643R3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14□□□□□ -0.17
LPCAT4Q643R3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LPCAT4Q643R3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14□□□□□ -0.17
LPCAT4Q643R3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LPCAT4Q643R3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 AKAP8P1-201ENST00000434743 1349 ntBASIC13.99□□□□□ -0.17
LPCAT4Q643R3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms