Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 AC234644.1-201ENST00000406065 370 ntBASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 E2F3P2-201ENST00000447755 1422 ntBASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 AC239868.1-201ENST00000369385 493 ntBASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 RPS9P1-201ENST00000419943 583 ntBASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 AC130709.1-201ENST00000484779 1212 ntBASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 AL031713.1-201ENST00000564813 661 ntBASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 MIR4649-201ENST00000582839 64 ntBASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 AC074138.1-201ENST00000611182 1303 ntBASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 AC242376.2-201ENST00000619355 883 ntBASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.81■□□□□ 0.12
CTC1Q2NKJ3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms