Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC006453.4-201ENST00000636949 1252 ntBASIC14.02□□□□□ -0.17
RAE1P78406 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.02□□□□□ -0.17
RAE1P78406 AC002472.3-201ENST00000640124 621 ntBASIC14.02□□□□□ -0.17
RAE1P78406 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAE1P78406 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.02□□□□□ -0.17
RAE1P78406 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
RAE1P78406 MYO15B-237ENST00000642007 4893 ntBASIC14.02□□□□□ -0.17
RAE1P78406 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.02□□□□□ -0.17
RAE1P78406 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RAE1P78406 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.02□□□□□ -0.17
RAE1P78406 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.02□□□□□ -0.17
RAE1P78406 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAE1P78406 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAE1P78406 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAE1P78406 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.02□□□□□ -0.17
RAE1P78406 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAE1P78406 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RAE1P78406 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
RAE1P78406 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAE1P78406 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 PKD1P5-201ENST00000532415 10291 ntBASIC14.01□□□□□ -0.17
RAE1P78406 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.01□□□□□ -0.17
RAE1P78406 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
RAE1P78406 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAE1P78406 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.01□□□□□ -0.17
RAE1P78406 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.01□□□□□ -0.17
RAE1P78406 CU639417.3-201ENST00000624240 1404 ntBASIC14.01□□□□□ -0.17
RAE1P78406 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RAE1P78406 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RAE1P78406 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.01□□□□□ -0.17
RAE1P78406 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 CD8B2-202ENST00000417670 633 ntBASIC14.01□□□□□ -0.17
RAE1P78406 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.01□□□□□ -0.17
RAE1P78406 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.01□□□□□ -0.17
RAE1P78406 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.01□□□□□ -0.17
RAE1P78406 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.01□□□□□ -0.17
RAE1P78406 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RAE1P78406 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
RAE1P78406 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RAE1P78406 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.01□□□□□ -0.17
RAE1P78406 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.01□□□□□ -0.17
RAE1P78406 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAE1P78406 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.01□□□□□ -0.17
RAE1P78406 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAE1P78406 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.01□□□□□ -0.17
RAE1P78406 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAE1P78406 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAE1P78406 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.01□□□□□ -0.17
RAE1P78406 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RAE1P78406 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14□□□□□ -0.17
RAE1P78406 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14□□□□□ -0.17
RAE1P78406 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14□□□□□ -0.17
RAE1P78406 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RAE1P78406 BEND3P1-201ENST00000421591 1944 ntBASIC14□□□□□ -0.17
RAE1P78406 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14□□□□□ -0.17
RAE1P78406 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14□□□□□ -0.17
RAE1P78406 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14□□□□□ -0.17
RAE1P78406 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14□□□□□ -0.17
RAE1P78406 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14□□□□□ -0.17
RAE1P78406 AC007551.1-201ENST00000457394 519 ntBASIC14□□□□□ -0.17
RAE1P78406 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms