Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.27□□□□□ -0.29
ACTA1P68133 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.27□□□□□ -0.29
ACTA1P68133 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.27□□□□□ -0.29
ACTA1P68133 KLF2P3-201ENST00000451977 1087 ntBASIC13.27□□□□□ -0.29
ACTA1P68133 FAM86LP-201ENST00000478302 853 ntBASIC13.27□□□□□ -0.29
ACTA1P68133 HLA-J-203ENST00000494367 1087 ntBASIC13.27□□□□□ -0.29
ACTA1P68133 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.27□□□□□ -0.29
ACTA1P68133 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.27□□□□□ -0.29
ACTA1P68133 AL049840.4-201ENST00000602422 811 ntBASIC13.27□□□□□ -0.29
ACTA1P68133 BX539320.1-201ENST00000623759 877 ntBASIC13.27□□□□□ -0.29
ACTA1P68133 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 AC015818.8-201ENST00000587907 1519 ntBASIC13.27□□□□□ -0.29
ACTA1P68133 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
ACTA1P68133 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 AC092053.3-201ENST00000641308 4975 ntBASIC13.27□□□□□ -0.29
ACTA1P68133 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.27□□□□□ -0.29
ACTA1P68133 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 AC012617.1-204ENST00000586340 2305 ntBASIC13.27□□□□□ -0.29
ACTA1P68133 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ACTA1P68133 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.26□□□□□ -0.29
ACTA1P68133 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ACTA1P68133 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
ACTA1P68133 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.26□□□□□ -0.29
ACTA1P68133 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ACTA1P68133 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ACTA1P68133 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.26□□□□□ -0.29
ACTA1P68133 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.26□□□□□ -0.29
ACTA1P68133 SALL4P5-201ENST00000419001 1760 ntBASIC13.26□□□□□ -0.29
ACTA1P68133 CLK3P2-201ENST00000427566 1453 ntBASIC13.26□□□□□ -0.29
ACTA1P68133 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.26□□□□□ -0.29
ACTA1P68133 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.26□□□□□ -0.29
ACTA1P68133 AC022616.1-201ENST00000518688 554 ntBASIC13.26□□□□□ -0.29
ACTA1P68133 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.26□□□□□ -0.29
ACTA1P68133 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.26□□□□□ -0.29
ACTA1P68133 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.26□□□□□ -0.29
ACTA1P68133 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.26□□□□□ -0.29
ACTA1P68133 AC004449.1-201ENST00000564240 433 ntBASIC13.26□□□□□ -0.29
ACTA1P68133 AC140878.1-201ENST00000565277 250 ntBASIC13.26□□□□□ -0.29
ACTA1P68133 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.26□□□□□ -0.29
ACTA1P68133 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 AL136172.1-201ENST00000598590 1394 ntBASIC13.26□□□□□ -0.29
ACTA1P68133 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.26□□□□□ -0.29
ACTA1P68133 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.26□□□□□ -0.29
ACTA1P68133 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.26□□□□□ -0.29
ACTA1P68133 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ACTA1P68133 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ACTA1P68133 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ACTA1P68133 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ACTA1P68133 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.25□□□□□ -0.29
ACTA1P68133 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.25□□□□□ -0.29
ACTA1P68133 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ACTA1P68133 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms