Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.92□□□□□ -0.34
UBA52P62987 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.92□□□□□ -0.34
UBA52P62987 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.92□□□□□ -0.34
UBA52P62987 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
UBA52P62987 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
UBA52P62987 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
UBA52P62987 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
UBA52P62987 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.92□□□□□ -0.34
UBA52P62987 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.92□□□□□ -0.34
UBA52P62987 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.92□□□□□ -0.34
UBA52P62987 AL023775.1-201ENST00000454907 1746 ntBASIC12.92□□□□□ -0.34
UBA52P62987 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.92□□□□□ -0.34
UBA52P62987 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 CTBP2P3-201ENST00000585629 1255 ntBASIC12.92□□□□□ -0.34
UBA52P62987 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
UBA52P62987 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UBA52P62987 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UBA52P62987 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UBA52P62987 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UBA52P62987 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.91□□□□□ -0.34
UBA52P62987 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.91□□□□□ -0.34
UBA52P62987 AC015909.5-201ENST00000624336 2266 ntBASIC12.91□□□□□ -0.34
UBA52P62987 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 AC105206.1-202ENST00000314927 2368 ntBASIC12.91□□□□□ -0.34
UBA52P62987 MTHFR-210ENST00000641407 2387 ntBASIC12.91□□□□□ -0.34
UBA52P62987 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
UBA52P62987 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UBA52P62987 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.91□□□□□ -0.34
UBA52P62987 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 AL589987.1-201ENST00000453380 819 ntBASIC12.91□□□□□ -0.34
UBA52P62987 AC007389.4-201ENST00000454674 793 ntBASIC12.91□□□□□ -0.34
UBA52P62987 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.91□□□□□ -0.34
UBA52P62987 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
UBA52P62987 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.91□□□□□ -0.34
UBA52P62987 AL512343.1-201ENST00000605837 169 ntBASIC12.91□□□□□ -0.34
UBA52P62987 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.91□□□□□ -0.34
UBA52P62987 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.91□□□□□ -0.34
UBA52P62987 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
UBA52P62987 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms