Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 AC125807.2-201ENST00000513358 3514 ntBASIC13.33□□□□□ -0.28
VBP1P61758 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 AC025580.3-201ENST00000617932 1424 ntBASIC13.33□□□□□ -0.28
VBP1P61758 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 PCDHA6-201ENST00000378126 3267 ntBASIC13.33□□□□□ -0.28
VBP1P61758 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
VBP1P61758 HLA-H-201ENST00000383620 1096 ntBASIC13.33□□□□□ -0.28
VBP1P61758 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.33□□□□□ -0.28
VBP1P61758 AL133267.1-201ENST00000398220 340 ntBASIC13.33□□□□□ -0.28
VBP1P61758 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.33□□□□□ -0.28
VBP1P61758 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.33□□□□□ -0.28
VBP1P61758 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.33□□□□□ -0.28
VBP1P61758 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.33□□□□□ -0.28
VBP1P61758 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.33□□□□□ -0.28
VBP1P61758 AC091304.2-201ENST00000564639 760 ntBASIC13.33□□□□□ -0.28
VBP1P61758 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.33□□□□□ -0.28
VBP1P61758 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 AC011840.2-201ENST00000563063 1520 ntBASIC13.33□□□□□ -0.28
VBP1P61758 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
VBP1P61758 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
VBP1P61758 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VBP1P61758 AL031719.1-201ENST00000623365 2587 ntBASIC13.32□□□□□ -0.28
VBP1P61758 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 AC011498.7-201ENST00000624986 2027 ntBASIC13.32□□□□□ -0.28
VBP1P61758 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VBP1P61758 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VBP1P61758 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VBP1P61758 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VBP1P61758 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.32□□□□□ -0.28
VBP1P61758 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.32□□□□□ -0.28
VBP1P61758 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.32□□□□□ -0.28
VBP1P61758 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.32□□□□□ -0.28
VBP1P61758 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms