Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
EFNB2P52799 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 AC005562.1-201ENST00000583030 3219 ntBASIC12.88□□□□□ -0.35
EFNB2P52799 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.88□□□□□ -0.35
EFNB2P52799 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.88□□□□□ -0.35
EFNB2P52799 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.88□□□□□ -0.35
EFNB2P52799 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.88□□□□□ -0.35
EFNB2P52799 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.88□□□□□ -0.35
EFNB2P52799 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.88□□□□□ -0.35
EFNB2P52799 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
EFNB2P52799 AC010336.2-201ENST00000564226 506 ntBASIC12.88□□□□□ -0.35
EFNB2P52799 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
EFNB2P52799 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.88□□□□□ -0.35
EFNB2P52799 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 TEX28P1-201ENST00000613479 1221 ntBASIC12.88□□□□□ -0.35
EFNB2P52799 TEX28P2-201ENST00000617764 1221 ntBASIC12.88□□□□□ -0.35
EFNB2P52799 AL035252.4-201ENST00000624174 288 ntBASIC12.88□□□□□ -0.35
EFNB2P52799 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.88□□□□□ -0.35
EFNB2P52799 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
EFNB2P52799 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.88□□□□□ -0.35
EFNB2P52799 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.88□□□□□ -0.35
EFNB2P52799 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
EFNB2P52799 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
EFNB2P52799 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
EFNB2P52799 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
EFNB2P52799 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
EFNB2P52799 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.88□□□□□ -0.35
EFNB2P52799 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.88□□□□□ -0.35
EFNB2P52799 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.88□□□□□ -0.35
EFNB2P52799 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 AL158070.2-201ENST00000623713 1621 ntBASIC12.88□□□□□ -0.35
EFNB2P52799 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
EFNB2P52799 AC063926.2-201ENST00000623766 1308 ntBASIC12.88□□□□□ -0.35
EFNB2P52799 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB2P52799 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
EFNB2P52799 FAM90A12P-201ENST00000519497 2375 ntBASIC12.87□□□□□ -0.35
EFNB2P52799 FAM90A24P-201ENST00000520792 2369 ntBASIC12.87□□□□□ -0.35
EFNB2P52799 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 RN7SL832P-201ENST00000607781 1756 ntBASIC12.87□□□□□ -0.35
EFNB2P52799 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
EFNB2P52799 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.87□□□□□ -0.35
EFNB2P52799 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 PIN1P1-201ENST00000412108 996 ntBASIC12.87□□□□□ -0.35
EFNB2P52799 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.87□□□□□ -0.35
EFNB2P52799 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 AC009477.1-201ENST00000452936 217 ntBASIC12.87□□□□□ -0.35
EFNB2P52799 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 GAPDHP40-201ENST00000505218 1006 ntBASIC12.87□□□□□ -0.35
EFNB2P52799 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
EFNB2P52799 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms