Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC090616.6-203ENST00000579186 1945 ntBASIC16.29■□□□□ 0.2
CDK7P50613 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.29■□□□□ 0.2
CDK7P50613 KRT8P31-201ENST00000504812 1408 ntBASIC16.29■□□□□ 0.2
CDK7P50613 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDK7P50613 SALL4P5-201ENST00000419001 1760 ntBASIC16.29■□□□□ 0.2
CDK7P50613 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK7P50613 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDK7P50613 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK7P50613 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.29■□□□□ 0.2
CDK7P50613 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDK7P50613 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.29■□□□□ 0.2
CDK7P50613 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK7P50613 RBM8B-201ENST00000555532 525 ntBASIC16.29■□□□□ 0.2
CDK7P50613 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 AL132780.4-201ENST00000624870 1135 ntBASIC16.29■□□□□ 0.2
CDK7P50613 AC127024.7-201ENST00000625101 200 ntBASIC16.29■□□□□ 0.2
CDK7P50613 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK7P50613 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.29■□□□□ 0.2
CDK7P50613 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK7P50613 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 AC023090.2-201ENST00000625182 2110 ntBASIC16.28■□□□□ 0.2
CDK7P50613 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
CDK7P50613 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.28■□□□□ 0.2
CDK7P50613 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDK7P50613 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.28■□□□□ 0.2
CDK7P50613 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CDK7P50613 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.28■□□□□ 0.2
CDK7P50613 KRT18P36-201ENST00000411618 1276 ntBASIC16.28■□□□□ 0.2
CDK7P50613 AL807761.2-201ENST00000422849 729 ntBASIC16.28■□□□□ 0.2
CDK7P50613 TSPY25P-201ENST00000429463 745 ntBASIC16.28■□□□□ 0.2
CDK7P50613 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 LYPLA2P1-203ENST00000447689 696 ntBASIC16.28■□□□□ 0.2
CDK7P50613 AC018463.1-201ENST00000456674 917 ntBASIC16.28■□□□□ 0.2
CDK7P50613 TMCO5B-205ENST00000530020 894 ntBASIC16.28■□□□□ 0.2
CDK7P50613 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDK7P50613 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CDK7P50613 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.28■□□□□ 0.2
CDK7P50613 AC141586.1-203ENST00000567242 366 ntBASIC16.28■□□□□ 0.2
CDK7P50613 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDK7P50613 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 AC092299.1-201ENST00000632679 757 ntBASIC16.28■□□□□ 0.2
CDK7P50613 AP001184.1-201ENST00000637936 376 ntBASIC16.28■□□□□ 0.2
CDK7P50613 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDK7P50613 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.28■□□□□ 0.2
CDK7P50613 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDK7P50613 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDK7P50613 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDK7P50613 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.28■□□□□ 0.2
CDK7P50613 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK7P50613 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.27■□□□□ 0.2
CDK7P50613 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDK7P50613 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDK7P50613 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.27■□□□□ 0.2
CDK7P50613 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms