Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.15■□□□□ 0.02
SLC6A4P31645 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC6A4P31645 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.15■□□□□ 0.02
SLC6A4P31645 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 HLA-J-204ENST00000495278 958 ntBASIC15.15■□□□□ 0.02
SLC6A4P31645 SCARNA20.5-201ENST00000516991 142 ntBASIC15.15■□□□□ 0.02
SLC6A4P31645 SCARNA21-201ENST00000517026 139 ntBASIC15.15■□□□□ 0.02
SLC6A4P31645 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A4P31645 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A4P31645 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC6A4P31645 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC6A4P31645 ACTG1P17-201ENST00000558391 1119 ntBASIC15.15■□□□□ 0.02
SLC6A4P31645 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC6A4P31645 AC013355.1-201ENST00000562625 723 ntBASIC15.15■□□□□ 0.02
SLC6A4P31645 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A4P31645 AC090164.2-201ENST00000611487 516 ntBASIC15.15■□□□□ 0.02
SLC6A4P31645 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC6A4P31645 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 AL139099.5-201ENST00000635274 300 ntBASIC15.15■□□□□ 0.02
SLC6A4P31645 KHSRPP1-201ENST00000427983 1768 ntBASIC15.15■□□□□ 0.02
SLC6A4P31645 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A4P31645 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A4P31645 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC6A4P31645 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A4P31645 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A4P31645 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 FAM90A7P-201ENST00000382628 1395 ntBASIC15.14■□□□□ 0.01
SLC6A4P31645 FAM90A23P-201ENST00000400136 1395 ntBASIC15.14■□□□□ 0.01
SLC6A4P31645 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC6A4P31645 EIF4HP1-201ENST00000453115 687 ntBASIC15.14■□□□□ 0.01
SLC6A4P31645 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC6A4P31645 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC6A4P31645 AC106794.1-201ENST00000506935 792 ntBASIC15.14■□□□□ 0.01
SLC6A4P31645 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC6A4P31645 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC6A4P31645 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A4P31645 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 AC008805.1-201ENST00000590892 364 ntBASIC15.14■□□□□ 0.01
SLC6A4P31645 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC6A4P31645 AC138649.2-201ENST00000615886 705 ntBASIC15.14■□□□□ 0.01
SLC6A4P31645 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
SLC6A4P31645 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A4P31645 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC6A4P31645 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC6A4P31645 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC6A4P31645 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC6A4P31645 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A4P31645 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLC6A4P31645 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SLC6A4P31645 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC6A4P31645 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 AL133338.1-201ENST00000565695 1517 ntBASIC15.13■□□□□ 0.01
SLC6A4P31645 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC6A4P31645 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.13■□□□□ 0.01
SLC6A4P31645 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
SLC6A4P31645 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC6A4P31645 CALR4P-201ENST00000431943 946 ntBASIC15.13■□□□□ 0.01
SLC6A4P31645 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SLC6A4P31645 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC6A4P31645 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms