Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.15□□□□□ -0.3
MSR1P21757 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MSR1P21757 AP001267.2-201ENST00000532619 2086 ntBASIC13.15□□□□□ -0.3
MSR1P21757 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.15□□□□□ -0.3
MSR1P21757 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MSR1P21757 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MSR1P21757 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MSR1P21757 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MSR1P21757 AL136172.1-201ENST00000598590 1394 ntBASIC13.15□□□□□ -0.3
MSR1P21757 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.15□□□□□ -0.3
MSR1P21757 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MSR1P21757 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MSR1P21757 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.15□□□□□ -0.3
MSR1P21757 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MSR1P21757 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MSR1P21757 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.15□□□□□ -0.31
MSR1P21757 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
MSR1P21757 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 TPM3P8-201ENST00000330554 643 ntBASIC13.14□□□□□ -0.31
MSR1P21757 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 AC005229.1-201ENST00000392885 409 ntBASIC13.14□□□□□ -0.31
MSR1P21757 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.14□□□□□ -0.31
MSR1P21757 POM121L8P-201ENST00000417732 1281 ntBASIC13.14□□□□□ -0.31
MSR1P21757 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 POM121L9P-203ENST00000441984 1285 ntBASIC13.14□□□□□ -0.31
MSR1P21757 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 MESTP3-201ENST00000503460 968 ntBASIC13.14□□□□□ -0.31
MSR1P21757 AP001889.1-201ENST00000525414 633 ntBASIC13.14□□□□□ -0.31
MSR1P21757 AC131206.1-201ENST00000538078 1211 ntBASIC13.14□□□□□ -0.31
MSR1P21757 MIR3197-201ENST00000582241 73 ntBASIC13.14□□□□□ -0.31
MSR1P21757 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.14□□□□□ -0.31
MSR1P21757 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 AC138466.3-201ENST00000619983 221 ntBASIC13.14□□□□□ -0.31
MSR1P21757 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
MSR1P21757 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 AGGF1P1-201ENST00000509500 2073 ntBASIC13.14□□□□□ -0.31
MSR1P21757 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 AC097359.2-201ENST00000604992 2389 ntBASIC13.14□□□□□ -0.31
MSR1P21757 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MSR1P21757 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.14□□□□□ -0.31
MSR1P21757 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
MSR1P21757 CLUHP2-201ENST00000426660 1303 ntBASIC13.13□□□□□ -0.31
MSR1P21757 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.13□□□□□ -0.31
MSR1P21757 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MSR1P21757 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MSR1P21757 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
MSR1P21757 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.13□□□□□ -0.31
MSR1P21757 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MSR1P21757 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MSR1P21757 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MSR1P21757 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MSR1P21757 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.13□□□□□ -0.31
MSR1P21757 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MSR1P21757 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
MSR1P21757 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
MSR1P21757 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms