Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL2P13500 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CCL2P13500 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL2P13500 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCL2P13500 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL2P13500 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CCL2P13500 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL2P13500 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL2P13500 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCL2P13500 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL2P13500 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CCL2P13500 AL390755.1-201ENST00000623716 2027 ntBASIC12.96□□□□□ -0.33
CCL2P13500 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL2P13500 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL2P13500 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL2P13500 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CCL2P13500 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 AL138725.1-201ENST00000407347 1314 ntBASIC12.96□□□□□ -0.33
CCL2P13500 AHCYP2-201ENST00000430630 1300 ntBASIC12.96□□□□□ -0.33
CCL2P13500 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL2P13500 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.96□□□□□ -0.33
CCL2P13500 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CCL2P13500 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 HLA-V-201ENST00000429037 534 ntBASIC12.96□□□□□ -0.33
CCL2P13500 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CCL2P13500 COX5BP1-201ENST00000507622 393 ntBASIC12.96□□□□□ -0.33
CCL2P13500 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CCL2P13500 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL2P13500 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.96□□□□□ -0.33
CCL2P13500 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.96□□□□□ -0.33
CCL2P13500 AC138696.2-201ENST00000607376 223 ntBASIC12.96□□□□□ -0.33
CCL2P13500 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.96□□□□□ -0.33
CCL2P13500 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.96□□□□□ -0.33
CCL2P13500 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL2P13500 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CCL2P13500 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
CCL2P13500 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 AC232323.1-201ENST00000540724 2099 ntBASIC12.96□□□□□ -0.33
CCL2P13500 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL2P13500 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL2P13500 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
CCL2P13500 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL2P13500 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL2P13500 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL2P13500 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL2P13500 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL2P13500 KRT8P4-201ENST00000509735 1454 ntBASIC12.96□□□□□ -0.34
CCL2P13500 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL2P13500 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL2P13500 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL2P13500 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL2P13500 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL2P13500 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL2P13500 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CCL2P13500 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL2P13500 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL2P13500 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CCL2P13500 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL2P13500 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CCL2P13500 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL2P13500 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL2P13500 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL2P13500 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL2P13500 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 AC099336.1-201ENST00000417053 1171 ntBASIC12.95□□□□□ -0.34
CCL2P13500 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL2P13500 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.95□□□□□ -0.34
CCL2P13500 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CCL2P13500 KRT223P-202ENST00000449164 1292 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms