Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.95□□□□□ -0.02
RETP07949 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 MROH4P-201ENST00000431302 1578 ntBASIC14.95□□□□□ -0.02
RETP07949 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.95□□□□□ -0.02
RETP07949 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.95□□□□□ -0.02
RETP07949 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RETP07949 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.95□□□□□ -0.02
RETP07949 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RETP07949 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.95□□□□□ -0.02
RETP07949 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 AC073150.1-201ENST00000450406 1084 ntBASIC14.95□□□□□ -0.02
RETP07949 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.95□□□□□ -0.02
RETP07949 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.95□□□□□ -0.02
RETP07949 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.95□□□□□ -0.02
RETP07949 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.95□□□□□ -0.02
RETP07949 RCC2P8-201ENST00000502779 1035 ntBASIC14.95□□□□□ -0.02
RETP07949 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RETP07949 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.95□□□□□ -0.02
RETP07949 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.95□□□□□ -0.02
RETP07949 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.95□□□□□ -0.02
RETP07949 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
RETP07949 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.95□□□□□ -0.02
RETP07949 AL136301.1-201ENST00000615830 422 ntBASIC14.95□□□□□ -0.02
RETP07949 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
RETP07949 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
RETP07949 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RETP07949 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RETP07949 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
RETP07949 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RETP07949 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.94□□□□□ -0.02
RETP07949 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RETP07949 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RETP07949 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.94□□□□□ -0.02
RETP07949 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.94□□□□□ -0.02
RETP07949 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.94□□□□□ -0.02
RETP07949 MESTP3-201ENST00000503460 968 ntBASIC14.94□□□□□ -0.02
RETP07949 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.94□□□□□ -0.02
RETP07949 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.94□□□□□ -0.02
RETP07949 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.94□□□□□ -0.02
RETP07949 MIR4313-201ENST00000580760 101 ntBASIC14.94□□□□□ -0.02
RETP07949 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.94□□□□□ -0.02
RETP07949 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.94□□□□□ -0.02
RETP07949 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RETP07949 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.94□□□□□ -0.02
RETP07949 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RETP07949 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 AC127383.1-201ENST00000444697 1800 ntBASIC14.94□□□□□ -0.02
RETP07949 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.94□□□□□ -0.02
RETP07949 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RETP07949 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RETP07949 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RETP07949 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.93□□□□□ -0.02
RETP07949 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.93□□□□□ -0.02
RETP07949 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms