Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHRNA1P02708 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.97■□□□□ 0.15
CHRNA1P02708 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.97■□□□□ 0.15
CHRNA1P02708 KHSRPP1-201ENST00000427983 1768 ntBASIC15.97■□□□□ 0.15
CHRNA1P02708 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA1P02708 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA1P02708 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA1P02708 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA1P02708 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA1P02708 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA1P02708 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CHRNA1P02708 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHRNA1P02708 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.97■□□□□ 0.15
CHRNA1P02708 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA1P02708 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA1P02708 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA1P02708 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA1P02708 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA1P02708 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHRNA1P02708 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA1P02708 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRNA1P02708 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CHRNA1P02708 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA1P02708 AC105917.1-201ENST00000506637 2539 ntBASIC15.96■□□□□ 0.15
CHRNA1P02708 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA1P02708 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 AL807761.2-201ENST00000422849 729 ntBASIC15.96■□□□□ 0.15
CHRNA1P02708 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA1P02708 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHRNA1P02708 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA1P02708 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA1P02708 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA1P02708 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.96■□□□□ 0.15
CHRNA1P02708 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA1P02708 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA1P02708 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRNA1P02708 DNM1P30-201ENST00000563586 452 ntBASIC15.96■□□□□ 0.15
CHRNA1P02708 AC093752.3-201ENST00000567343 901 ntBASIC15.96■□□□□ 0.15
CHRNA1P02708 AC124068.2-201ENST00000569473 1109 ntBASIC15.96■□□□□ 0.15
CHRNA1P02708 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRNA1P02708 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.96■□□□□ 0.15
CHRNA1P02708 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 AC007881.3-201ENST00000608897 607 ntBASIC15.96■□□□□ 0.15
CHRNA1P02708 AL022334.2-201ENST00000610000 484 ntBASIC15.96■□□□□ 0.15
CHRNA1P02708 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHRNA1P02708 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHRNA1P02708 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA1P02708 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHRNA1P02708 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA1P02708 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CHRNA1P02708 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CHRNA1P02708 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHRNA1P02708 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHRNA1P02708 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHRNA1P02708 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CHRNA1P02708 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
CHRNA1P02708 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA1P02708 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA1P02708 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CHRNA1P02708 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA1P02708 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
CHRNA1P02708 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.95■□□□□ 0.14
CHRNA1P02708 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CHRNA1P02708 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA1P02708 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRNA1P02708 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRNA1P02708 RPL7P35-201ENST00000446943 740 ntBASIC15.95■□□□□ 0.14
CHRNA1P02708 DUX4L50-201ENST00000455245 715 ntBASIC15.95■□□□□ 0.14
CHRNA1P02708 RN7SL8P-201ENST00000461771 266 ntBASIC15.95■□□□□ 0.14
CHRNA1P02708 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CHRNA1P02708 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.95■□□□□ 0.14
CHRNA1P02708 AL031713.1-201ENST00000564813 661 ntBASIC15.95■□□□□ 0.14
CHRNA1P02708 RPL17P45-201ENST00000586289 509 ntBASIC15.95■□□□□ 0.14
CHRNA1P02708 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms