Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC3P02656 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC3P02656 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
APOC3P02656 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 AL589702.1-201ENST00000641229 1509 ntBASIC11.87□□□□□ -0.51
APOC3P02656 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC3P02656 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOC3P02656 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 NCF1B-203ENST00000435988 1254 ntBASIC11.87□□□□□ -0.51
APOC3P02656 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
APOC3P02656 AC128688.1-201ENST00000487626 519 ntBASIC11.87□□□□□ -0.51
APOC3P02656 SLC25A6P2-201ENST00000497974 877 ntBASIC11.87□□□□□ -0.51
APOC3P02656 AP001412.1-201ENST00000608405 714 ntBASIC11.87□□□□□ -0.51
APOC3P02656 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.87□□□□□ -0.51
APOC3P02656 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC3P02656 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.87□□□□□ -0.51
APOC3P02656 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOC3P02656 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOC3P02656 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 AC018665.1-201ENST00000622927 1362 ntBASIC11.87□□□□□ -0.51
APOC3P02656 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOC3P02656 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC3P02656 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
APOC3P02656 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC3P02656 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC3P02656 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
APOC3P02656 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 AC026271.4-201ENST00000578214 1833 ntBASIC11.86□□□□□ -0.51
APOC3P02656 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC3P02656 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
APOC3P02656 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
APOC3P02656 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC3P02656 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC3P02656 TSPY14P-201ENST00000303979 915 ntBASIC11.86□□□□□ -0.51
APOC3P02656 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
APOC3P02656 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
APOC3P02656 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC3P02656 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC3P02656 AL359075.1-203ENST00000462729 1002 ntBASIC11.86□□□□□ -0.51
APOC3P02656 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms