Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.2□□□□□ -0.14
CLOCKO15516 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
CLOCKO15516 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CLOCKO15516 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 AC007967.4-201ENST00000614700 386 ntBASIC14.2□□□□□ -0.14
CLOCKO15516 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.2□□□□□ -0.14
CLOCKO15516 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLOCKO15516 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.2□□□□□ -0.14
CLOCKO15516 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLOCKO15516 KRT8P22-201ENST00000562317 1415 ntBASIC14.19□□□□□ -0.14
CLOCKO15516 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CLOCKO15516 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.19□□□□□ -0.14
CLOCKO15516 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.19□□□□□ -0.14
CLOCKO15516 AC092580.3-201ENST00000430932 139 ntBASIC14.19□□□□□ -0.14
CLOCKO15516 AC002472.2-201ENST00000442739 958 ntBASIC14.19□□□□□ -0.14
CLOCKO15516 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.19□□□□□ -0.14
CLOCKO15516 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.19□□□□□ -0.14
CLOCKO15516 SLED1-202ENST00000512051 380 ntBASIC14.19□□□□□ -0.14
CLOCKO15516 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.19□□□□□ -0.14
CLOCKO15516 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CLOCKO15516 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 AL035456.1-201ENST00000456064 1369 ntBASIC14.19□□□□□ -0.14
CLOCKO15516 AC018665.1-201ENST00000622927 1362 ntBASIC14.19□□□□□ -0.14
CLOCKO15516 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLOCKO15516 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLOCKO15516 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.19□□□□□ -0.14
CLOCKO15516 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLOCKO15516 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.18□□□□□ -0.14
CLOCKO15516 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLOCKO15516 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CLOCKO15516 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLOCKO15516 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms