Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
NACAE9PAV3 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
NACAE9PAV3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NACAE9PAV3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
NACAE9PAV3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NACAE9PAV3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
NACAE9PAV3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.98□□□□□ -0.65
NACAE9PAV3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NACAE9PAV3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NACAE9PAV3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.98□□□□□ -0.65
NACAE9PAV3 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NACAE9PAV3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
NACAE9PAV3 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.97□□□□□ -0.65
NACAE9PAV3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.97□□□□□ -0.65
NACAE9PAV3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC10.97□□□□□ -0.65
NACAE9PAV3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC10.97□□□□□ -0.65
NACAE9PAV3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC10.97□□□□□ -0.65
NACAE9PAV3 CLK3P2-201ENST00000427566 1453 ntBASIC10.97□□□□□ -0.65
NACAE9PAV3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10.97□□□□□ -0.65
NACAE9PAV3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.97□□□□□ -0.65
NACAE9PAV3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.97□□□□□ -0.65
NACAE9PAV3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC10.97□□□□□ -0.65
NACAE9PAV3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC10.97□□□□□ -0.65
NACAE9PAV3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.97□□□□□ -0.65
NACAE9PAV3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.97□□□□□ -0.65
NACAE9PAV3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 RPL13P2-201ENST00000440687 659 ntBASIC10.97□□□□□ -0.65
NACAE9PAV3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.97□□□□□ -0.65
NACAE9PAV3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.97□□□□□ -0.65
NACAE9PAV3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC10.97□□□□□ -0.65
NACAE9PAV3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NACAE9PAV3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC10.96□□□□□ -0.65
NACAE9PAV3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.96□□□□□ -0.65
NACAE9PAV3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.96□□□□□ -0.65
NACAE9PAV3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
NACAE9PAV3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.96□□□□□ -0.65
NACAE9PAV3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.96□□□□□ -0.65
NACAE9PAV3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
NACAE9PAV3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 NME2P1-201ENST00000426182 414 ntBASIC10.96□□□□□ -0.65
NACAE9PAV3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.96□□□□□ -0.65
NACAE9PAV3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NACAE9PAV3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms