Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 AL136116.3-201ENST00000402907 1138 ntBASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 OR2A1-AS1-204ENST00000470435 602 ntBASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 HS6ST1P1-201ENST00000481504 1234 ntBASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 AL691432.1-201ENST00000596308 1422 ntBASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 HSPA8P5-201ENST00000456928 2069 ntBASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF493-208ENST00000599461 1769 ntBASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 KIF28P-202ENST00000504864 3064 ntBASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 SLC9A3P2-201ENST00000447821 2021 ntBASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 API5-203ENST00000455725 2257 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 SEPT6-205ENST00000394610 4694 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms