Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 AC215219.1-201ENST00000400706 1817 ntBASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 AC132192.2-201ENST00000596206 1147 ntBASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 AC009955.4-201ENST00000597192 544 ntBASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 AL008721.1-201ENST00000609964 604 ntBASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 RPS2P32-201ENST00000439199 892 ntBASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 RPL13AP20-201ENST00000459725 609 ntBASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 RN7SL560P-201ENST00000577943 264 ntBASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 AC015656.1-201ENST00000624209 3578 ntBASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA4Q9UN74 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA4Q9UN74 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms