Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AC092612.1-201ENST00000514501 998 ntBASIC13.54□□□□□ -0.24
DKK4Q9UBT3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AL160191.2-201ENST00000603975 601 ntBASIC13.54□□□□□ -0.24
DKK4Q9UBT3 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 KRT8P28-201ENST00000433288 1390 ntBASIC13.54□□□□□ -0.24
DKK4Q9UBT3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.54□□□□□ -0.24
DKK4Q9UBT3 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 CICP11-201ENST00000434745 2827 ntBASIC13.53□□□□□ -0.24
DKK4Q9UBT3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 ASS1P2-201ENST00000439895 1223 ntBASIC13.53□□□□□ -0.24
DKK4Q9UBT3 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 RN7SL121P-201ENST00000584223 273 ntBASIC13.53□□□□□ -0.24
DKK4Q9UBT3 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 AL133467.4-201ENST00000602953 725 ntBASIC13.53□□□□□ -0.24
DKK4Q9UBT3 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 WASH3P-207ENST00000560956 1394 ntBASIC13.53□□□□□ -0.24
DKK4Q9UBT3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
DKK4Q9UBT3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
DKK4Q9UBT3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
DKK4Q9UBT3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
DKK4Q9UBT3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
DKK4Q9UBT3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
DKK4Q9UBT3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
DKK4Q9UBT3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.24
DKK4Q9UBT3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
DKK4Q9UBT3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms