Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 AP003171.2-201ENST00000528208 925 ntBASIC12.53□□□□□ -0.4
RNF7Q9UBF6 DUX4L45-201ENST00000566406 1057 ntBASIC12.53□□□□□ -0.4
RNF7Q9UBF6 AC010328.2-201ENST00000597698 1111 ntBASIC12.53□□□□□ -0.4
RNF7Q9UBF6 BX088702.1-201ENST00000610784 235 ntBASIC12.53□□□□□ -0.4
RNF7Q9UBF6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 MTHFR-210ENST00000641407 2387 ntBASIC12.53□□□□□ -0.4
RNF7Q9UBF6 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 AC092053.3-201ENST00000641308 4975 ntBASIC12.53□□□□□ -0.4
RNF7Q9UBF6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 AC007292.2-201ENST00000593524 1812 ntBASIC12.53□□□□□ -0.4
RNF7Q9UBF6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF7Q9UBF6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RNF7Q9UBF6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 AP006547.1-201ENST00000563435 692 ntBASIC12.52□□□□□ -0.41
RNF7Q9UBF6 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.52□□□□□ -0.41
RNF7Q9UBF6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 MIR4683-201ENST00000579659 81 ntBASIC12.52□□□□□ -0.41
RNF7Q9UBF6 MIR4259-201ENST00000584466 101 ntBASIC12.52□□□□□ -0.41
RNF7Q9UBF6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 AC009093.2-202ENST00000620513 2079 ntBASIC12.52□□□□□ -0.41
RNF7Q9UBF6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RNF7Q9UBF6 AC007686.3-201ENST00000619017 3487 ntBASIC12.52□□□□□ -0.41
RNF7Q9UBF6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RNF7Q9UBF6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms