Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL356740.2-201ENST00000601559 647 ntBASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 AC008622.2-201ENST00000617006 1229 ntBASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 PBX1-212ENST00000540236 6175 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 ALDH18A1-201ENST00000371221 3337 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF461-204ENST00000588268 2584 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 ITSN1-207ENST00000399338 3115 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 DENND2A-210ENST00000537639 3452 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 AC080013.1-204ENST00000607426 2185 ntBASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 TP73-AS1-210ENST00000637775 1455 ntBASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 FAM131A-201ENST00000310585 3677 ntTSL 2 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 DUSP27-202ENST00000361200 4164 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 RASA4CP-201ENST00000424092 1398 ntBASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 POM121L7P-201ENST00000329949 2404 ntBASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 COA5-202ENST00000409997 557 ntTSL 4 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 TPRG1LP1-201ENST00000598702 760 ntBASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 AL662799.1-202ENST00000614205 422 ntBASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 AC008555.2-202ENST00000601776 5302 ntTSL 2 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 TMC2-201ENST00000358864 3169 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 ABR-201ENST00000291107 2673 ntTSL 2 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 TRAF3IP2-208ENST00000392556 2188 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 TKTL1-202ENST00000369915 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms