Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AC097376.2-205ENST00000610159 5334 ntBASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AL354877.1-201ENST00000424412 413 ntBASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AC099548.2-209ENST00000480264 625 ntBASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AC021723.1-201ENST00000486306 515 ntBASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 GCOM2-201ENST00000509133 1104 ntBASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 MIR4783-201ENST00000580343 82 ntBASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 AC006058.4-201ENST00000624016 1670 ntBASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 FGD5P1-202ENST00000614866 2498 ntBASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
VAT1LQ9HCJ6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 RNMTL1P1-201ENST00000454103 560 ntBASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 AC007663.3-201ENST00000609632 465 ntBASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 MTHFR-210ENST00000641407 2387 ntBASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAT1LQ9HCJ6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAT1LQ9HCJ6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms