Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 WASH3P-207ENST00000560956 1394 ntBASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 AC005229.1-201ENST00000392885 409 ntBASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 BNIP3P42-201ENST00000454982 569 ntBASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 CTBP2P5-201ENST00000454986 1264 ntBASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 AC009486.1-201ENST00000569860 813 ntBASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 BNIP3P29-201ENST00000598302 571 ntBASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 AC011447.5-201ENST00000616168 564 ntBASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 AL121723.1-201ENST00000445194 1519 ntBASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF4Q9BUZ4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 AL355864.2-201ENST00000447420 863 ntBASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 BCRP2-202ENST00000447763 634 ntBASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 AC092658.1-201ENST00000505836 891 ntBASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 BCRP6-201ENST00000510112 632 ntBASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 BCRP7-201ENST00000511549 544 ntBASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 AP001889.1-201ENST00000525414 633 ntBASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF4Q9BUZ4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms