Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 KRT8P24-201ENST00000560290 1559 ntBASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 AL512384.1-201ENST00000406683 331 ntBASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 AC092552.1-201ENST00000547243 906 ntBASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 WFDC1-204ENST00000613603 549 ntBASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
TUBA1CQ9BQE3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 FAM86LP-201ENST00000478302 853 ntBASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 GIMAP3P-201ENST00000495150 836 ntBASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TUBA1CQ9BQE3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms