Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF2Q99496 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF2Q99496 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF2Q99496 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF2Q99496 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 POM121L4P-202ENST00000427789 1891 ntBASIC11.93□□□□□ -0.5
RNF2Q99496 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 FP325330.2-201ENST00000624219 5630 ntBASIC11.93□□□□□ -0.5
RNF2Q99496 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF2Q99496 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF2Q99496 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF2Q99496 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF2Q99496 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
RNF2Q99496 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF2Q99496 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.93□□□□□ -0.5
RNF2Q99496 AC074338.1-201ENST00000416825 156 ntBASIC11.93□□□□□ -0.5
RNF2Q99496 TSSK5P-201ENST00000423978 907 ntBASIC11.93□□□□□ -0.5
RNF2Q99496 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF2Q99496 BASP1P1-201ENST00000430708 665 ntBASIC11.93□□□□□ -0.5
RNF2Q99496 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF2Q99496 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF2Q99496 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RNF2Q99496 CYMP-203ENST00000474680 1263 ntBASIC11.93□□□□□ -0.5
RNF2Q99496 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.93□□□□□ -0.5
RNF2Q99496 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF2Q99496 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF2Q99496 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.93□□□□□ -0.5
RNF2Q99496 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF2Q99496 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF2Q99496 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF2Q99496 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF2Q99496 AC005498.2-205ENST00000593218 784 ntBASIC11.93□□□□□ -0.5
RNF2Q99496 AL390955.2-201ENST00000603032 514 ntBASIC11.93□□□□□ -0.5
RNF2Q99496 AC074044.1-201ENST00000609673 707 ntBASIC11.93□□□□□ -0.5
RNF2Q99496 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF2Q99496 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF2Q99496 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF2Q99496 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RNF2Q99496 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 AC005562.1-201ENST00000583030 3219 ntBASIC11.93□□□□□ -0.5
RNF2Q99496 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF2Q99496 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF2Q99496 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF2Q99496 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF2Q99496 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF2Q99496 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF2Q99496 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
RNF2Q99496 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF2Q99496 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF2Q99496 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.92□□□□□ -0.5
RNF2Q99496 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.92□□□□□ -0.5
RNF2Q99496 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RNF2Q99496 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.92□□□□□ -0.5
RNF2Q99496 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.92□□□□□ -0.5
RNF2Q99496 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RNF2Q99496 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RNF2Q99496 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.92□□□□□ -0.5
RNF2Q99496 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
RNF2Q99496 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RNF2Q99496 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RNF2Q99496 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms